IL_6BY1_365
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BY1_365 not in the Motif Atlas
- Homologous match to IL_6CZR_409
- Geometric discrepancy: 0.1724
- The information below is about IL_6CZR_409
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
6BY1|1|BA|A|673
6BY1|1|BA|G|674
6BY1|1|BA|A|675
6BY1|1|BA|A|676
6BY1|1|BA|U|677
*
6BY1|1|BA|G|713
6BY1|1|BA|G|714
6BY1|1|BA|A|715
6BY1|1|BA|A|716
6BY1|1|BA|U|717
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BF
- 30S ribosomal protein S6
- Chain BK
- 30S ribosomal protein S11
- Chain BR
- 30S ribosomal protein S18
- Chain DC
- 50S ribosomal protein L2
Coloring options: