IL_6BY1_397

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GGUUAAUUGAUG*UUGAUCGAAGCC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BY1|1|DA|G|1849
6BY1|1|DA|G|1850
6BY1|1|DA|U|1851
6BY1|1|DA|U|1852
6BY1|1|DA|A|1853
6BY1|1|DA|A|1854
6BY1|1|DA|U|1855
6BY1|1|DA|U|1856
6BY1|1|DA|G|1857
6BY1|1|DA|A|1858
6BY1|1|DA|U|1859
6BY1|1|DA|G|1860
*
6BY1|1|DA|U|1882
6BY1|1|DA|U|1883
6BY1|1|DA|G|1884
6BY1|1|DA|A|1885
6BY1|1|DA|U|1886
6BY1|1|DA|C|1887
6BY1|1|DA|G|1888
6BY1|1|DA|A|1889
6BY1|1|DA|A|1890
6BY1|1|DA|G|1891
6BY1|1|DA|C|1892
6BY1|1|DA|C|1893

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA