IL_6BY1_402
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- GGC*GUAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BY1_402 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.2731
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6BY1|1|DA|G|2838
6BY1|1|DA|G|2839
6BY1|1|DA|C|2840
*
6BY1|1|DA|G|2877
6BY1|1|DA|U|2878
6BY1|1|DA|A|2879
6BY1|1|DA|C|2880
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L32
- Chain DD
- 50S ribosomal protein L3
- Chain DN
- 50S ribosomal protein L17
- Chain DP
- 50S ribosomal protein L19
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