3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
UUAAG*CGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_076 not in the Motif Atlas
Homologous match to IL_4WF9_019
Geometric discrepancy: 0.1175
The information below is about IL_4WF9_019
Detailed Annotation
AAA cross-strand stack
Broad Annotation
AAA cross-strand stack
Motif group
IL_66798.2
Basepair signature
cWW-L-R-L-R-tHS-cWW
Number of instances in this motif group
6

Unit IDs

6BZ6|1|RA|U|606
6BZ6|1|RA|U|607
6BZ6|1|RA|A|608
6BZ6|1|RA|A|609
6BZ6|1|RA|G|609|||A
*
6BZ6|1|RA|C|618|||A
6BZ6|1|RA|G|619
6BZ6|1|RA|G|620
6BZ6|1|RA|A|621
6BZ6|1|RA|G|622

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RF
50S ribosomal protein L4
Chain RP
50S ribosomal protein L15

Coloring options:


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