3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_081 not in the Motif Atlas
Geometric match to IL_7RQB_021
Geometric discrepancy: 0.079
The information below is about IL_7RQB_021
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_56467.8
Basepair signature
cWW-tSH-tSH-tHS-cWW
Number of instances in this motif group
29

Unit IDs

6BZ6|1|RA|U|703
6BZ6|1|RA|G|704
6BZ6|1|RA|A|705
6BZ6|1|RA|A|706
6BZ6|1|RA|G|707
*
6BZ6|1|RA|U|724
6BZ6|1|RA|G|725
6BZ6|1|RA|G|726
6BZ6|1|RA|A|727
6BZ6|1|RA|G|728

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RD
50S ribosomal protein L2

Coloring options:


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