3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GG*UAC
Length
5 nucleotides
Bulged bases
6BZ6|1|RA|A|896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_092 not in the Motif Atlas
Homologous match to IL_5J7L_275
Geometric discrepancy: 0.3916
The information below is about IL_5J7L_275
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_29366.1
Basepair signature
cWW-cWW
Number of instances in this motif group
266

Unit IDs

6BZ6|1|RA|G|880
6BZ6|1|RA|G|881
*
6BZ6|1|RA|U|895
6BZ6|1|RA|A|896
6BZ6|1|RA|C|897

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RQ
50S ribosomal protein L16
Chain RZ
50S ribosomal protein L25

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1177 s