IL_6BZ6_092

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

6BZ6|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_092 not in the Motif Atlas

Homologous match to IL_5J7L_275

Geometric discrepancy: 0.3916

The information below is about IL_5J7L_275

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29366.1

Basepair signature

cWW-cWW

Number of instances in this motif group

266

Unit IDs

6BZ6|1|RA|G|880
6BZ6|1|RA|G|881
*
6BZ6|1|RA|U|895
6BZ6|1|RA|A|896
6BZ6|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RQ

50S ribosomal protein L16

Chain RZ

50S ribosomal protein L25