IL_6BZ6_133

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GGGAG*CGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_133 not in the Motif Atlas

Homologous match to IL_7RQB_075

Geometric discrepancy: 0.1112

The information below is about IL_7RQB_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

6BZ6|1|RA|G|1856
6BZ6|1|RA|G|1857
6BZ6|1|RA|G|1858
6BZ6|1|RA|A|1859
6BZ6|1|RA|G|1860
*
6BZ6|1|RA|C|1882
6BZ6|1|RA|G|1883
6BZ6|1|RA|A|1884
6BZ6|1|RA|A|1885
6BZ6|1|RA|C|1886

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28