3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GG*UCC
Length
5 nucleotides
Bulged bases
6BZ6|1|RA|C|2879
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_165 not in the Motif Atlas
Homologous match to IL_7RQB_108
Geometric discrepancy: 0.0842
The information below is about IL_7RQB_108
Detailed Annotation
Single bulged C
Broad Annotation
No text annotation
Motif group
IL_61258.12
Basepair signature
cWW-L-cWW
Number of instances in this motif group
40

Unit IDs

6BZ6|1|RA|G|2838
6BZ6|1|RA|G|2839
*
6BZ6|1|RA|U|2878
6BZ6|1|RA|C|2879
6BZ6|1|RA|C|2880

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RR
50S ribosomal protein L17

Coloring options:


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