IL_6BZ6_192

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_192 not in the Motif Atlas

Geometric match to IL_4LFB_019

Geometric discrepancy: 0.1029

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6BZ6|1|XA|G|450
6BZ6|1|XA|A|451
6BZ6|1|XA|A|452
6BZ6|1|XA|A|453
6BZ6|1|XA|C|454
6BZ6|1|XA|C|455
*
6BZ6|1|XA|G|477
6BZ6|1|XA|A|478
6BZ6|1|XA|C|479
6BZ6|1|XA|U|480
6BZ6|1|XA|G|481
6BZ6|1|XA|A|482
6BZ6|1|XA|C|483

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16