3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GGAAG*UGACAAC
Length
12 nucleotides
Bulged bases
6BZ6|1|YA|C|1544
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_297 not in the Motif Atlas
Homologous match to IL_7RQB_063
Geometric discrepancy: 0.3099
The information below is about IL_7RQB_063
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_02656.1
Basepair signature
cWW-L-R-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

6BZ6|1|YA|G|1526
6BZ6|1|YA|G|1527
6BZ6|1|YA|A|1528
6BZ6|1|YA|A|1529
6BZ6|1|YA|G|1530
*
6BZ6|1|YA|U|1541
6BZ6|1|YA|G|1542
6BZ6|1|YA|A|1543
6BZ6|1|YA|C|1544
6BZ6|1|YA|A|1545
6BZ6|1|YA|A|1545|||A
6BZ6|1|YA|C|1546

Current chains

Chain YA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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