IL_6BZ6_297

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

6BZ6|1|YA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_297 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.3099

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6BZ6|1|YA|G|1526
6BZ6|1|YA|G|1527
6BZ6|1|YA|A|1528
6BZ6|1|YA|A|1529
6BZ6|1|YA|G|1530
*
6BZ6|1|YA|U|1541
6BZ6|1|YA|G|1542
6BZ6|1|YA|A|1543
6BZ6|1|YA|C|1544
6BZ6|1|YA|A|1545
6BZ6|1|YA|A|1545|||A
6BZ6|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains