3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CAGAAG*UGGUG
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ6_360 not in the Motif Atlas
Geometric match to IL_4V9F_018
Geometric discrepancy: 0.3041
The information below is about IL_4V9F_018
Detailed Annotation
Triple sheared related
Broad Annotation
Triple sheared
Motif group
IL_97631.1
Basepair signature
cWW-L-R-L-R-L-tHS-cWW
Number of instances in this motif group
1

Unit IDs

6BZ6|1|RA|C|1468
6BZ6|1|RA|A|1469
6BZ6|1|RA|G|1470
6BZ6|1|RA|A|1471
6BZ6|1|RA|A|1472
6BZ6|1|RA|G|1473
*
6BZ6|1|RA|U|1520
6BZ6|1|RA|G|1521
6BZ6|1|RA|G|1522
6BZ6|1|RA|U|1523
6BZ6|1|RA|G|1524

Current chains

Chain RA
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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