IL_6BZ6_360

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CAGAAG*UGGUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_360 not in the Motif Atlas

Geometric match to IL_4V9F_018

Geometric discrepancy: 0.3041

The information below is about IL_4V9F_018

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_97631.1

Basepair signature

cWW-L-R-L-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

6BZ6|1|RA|C|1468
6BZ6|1|RA|A|1469
6BZ6|1|RA|G|1470
6BZ6|1|RA|A|1471
6BZ6|1|RA|A|1472
6BZ6|1|RA|G|1473
*
6BZ6|1|RA|U|1520
6BZ6|1|RA|G|1521
6BZ6|1|RA|G|1522
6BZ6|1|RA|U|1523
6BZ6|1|RA|G|1524

Current chains

Chain RA

23S rRNA

Nearby chains