3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GGAAUU*AGGAAC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_030 not in the Motif Atlas
Geometric match to IL_4LFB_030
Geometric discrepancy: 0.1005
The information below is about IL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

6BZ7|1|QA|G|673
6BZ7|1|QA|G|674
6BZ7|1|QA|A|675
6BZ7|1|QA|A|676
6BZ7|1|QA|U|677
6BZ7|1|QA|U|678
*
6BZ7|1|QA|A|712
6BZ7|1|QA|G|713
6BZ7|1|QA|G|714
6BZ7|1|QA|A|715
6BZ7|1|QA|A|716
6BZ7|1|QA|C|717

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QF
30S ribosomal protein S6
Chain QK
30S ribosomal protein S11
Chain QR
30S ribosomal protein S18
Chain RD
50S ribosomal protein L2

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2246 s