3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
6BZ7|1|RA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_095 not in the Motif Atlas
Homologous match to IL_7A0S_033
Geometric discrepancy: 0.101
The information below is about IL_7A0S_033
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

6BZ7|1|RA|C|998
6BZ7|1|RA|U|999
6BZ7|1|RA|A|1000
6BZ7|1|RA|A|1001
6BZ7|1|RA|G|1002
*
6BZ7|1|RA|C|1153
6BZ7|1|RA|G|1154
6BZ7|1|RA|A|1155
6BZ7|1|RA|A|1156
6BZ7|1|RA|G|1157

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R3
50S ribosomal protein L30
Chain RB
5S ribosomal RNA; 5S rRNA
Chain RU
50S ribosomal protein L20
Chain RV
50S ribosomal protein L21

Coloring options:


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