IL_6BZ7_104

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

6BZ7|1|RA|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_104 not in the Motif Atlas

Homologous match to IL_7A0S_041

Geometric discrepancy: 0.1217

The information below is about IL_7A0S_041

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.4

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

21

Unit IDs

6BZ7|1|RA|C|1196
6BZ7|1|RA|G|1197
6BZ7|1|RA|U|1198
*
6BZ7|1|RA|A|1247
6BZ7|1|RA|G|1248
6BZ7|1|RA|U|1249
6BZ7|1|RA|G|1250

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15

Chain RU

50S ribosomal protein L20