IL_6BZ7_172
3D structure
- PDB id
- 6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.68 Å
Loop
- Sequence
- UUCCC*GAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BZ7_172 not in the Motif Atlas
- Geometric match to IL_7RQB_114
- Geometric discrepancy: 0.1781
- The information below is about IL_7RQB_114
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.6
- Basepair signature
- cWW-cWS-L-tSW-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
6BZ7|1|RB|U|34
6BZ7|1|RB|U|35
6BZ7|1|RB|C|36
6BZ7|1|RB|C|37
6BZ7|1|RB|C|38
*
6BZ7|1|RB|G|44
6BZ7|1|RB|A|45
6BZ7|1|RB|A|46
6BZ7|1|RB|C|47
6BZ7|1|RB|A|48
Current chains
- Chain RB
- 5S rRNA
Nearby chains
- Chain R4
- 50S ribosomal protein L31
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RG
- 50S ribosomal protein L5
- Chain RS
- 50S ribosomal protein L18
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