3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CGAAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
6BZ7|1|YA|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_274 not in the Motif Atlas
Homologous match to IL_5J7L_284
Geometric discrepancy: 0.2705
The information below is about IL_5J7L_284
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

6BZ7|1|YA|C|1043
6BZ7|1|YA|G|1044
6BZ7|1|YA|A|1045
6BZ7|1|YA|A|1046
6BZ7|1|YA|G|1047
6BZ7|1|YA|A|1048
6BZ7|1|YA|C|1049
6BZ7|1|YA|A|1050
6BZ7|1|YA|G|1051
*
6BZ7|1|YA|U|1108
6BZ7|1|YA|C|1109
6BZ7|1|YA|G|1110
6BZ7|1|YA|A|1111
6BZ7|1|YA|G|1112

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YH
50S ribosomal protein L6

Coloring options:


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