3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GCCUG*CUGGC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_316 not in the Motif Atlas
Geometric match to IL_5TBW_121
Geometric discrepancy: 0.3016
The information below is about IL_5TBW_121
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_05145.3
Basepair signature
cWW-cWW-cWW-cWW-cWW
Number of instances in this motif group
13

Unit IDs

6BZ7|1|YA|G|2106
6BZ7|1|YA|C|2107
6BZ7|1|YA|C|2108
6BZ7|1|YA|U|2109
6BZ7|1|YA|G|2110
*
6BZ7|1|YA|C|2179
6BZ7|1|YA|U|2180
6BZ7|1|YA|G|2181
6BZ7|1|YA|G|2182
6BZ7|1|YA|C|2183

Current chains

Chain YA
23S rRNA

Nearby chains

Chain XW
Transfer RNA; tRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 1.3475 s