IL_6BZ7_329

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

6BZ7|1|YA|G|2576, 6BZ7|1|YA|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ7_329 not in the Motif Atlas

Homologous match to IL_7A0S_089

Geometric discrepancy: 0.1206

The information below is about IL_7A0S_089

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6BZ7|1|YA|C|2510
6BZ7|1|YA|U|2511
6BZ7|1|YA|C|2512
*
6BZ7|1|YA|G|2574
6BZ7|1|YA|C|2575
6BZ7|1|YA|G|2576
6BZ7|1|YA|A|2577
6BZ7|1|YA|G|2578

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain YE

50S ribosomal protein L3