3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CUAGUAC*GGACCG
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_334 not in the Motif Atlas
Geometric match to IL_7RQB_103
Geometric discrepancy: 0.1544
The information below is about IL_7RQB_103
Detailed Annotation
Sarcin-Ricin target in LSU H95; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_16458.1
Basepair signature
cWW-L-R-L-R-cSH-tWH-tHS-cWW
Number of instances in this motif group
7

Unit IDs

6BZ7|1|YA|C|2652
6BZ7|1|YA|U|2653
6BZ7|1|YA|A|2654
6BZ7|1|YA|G|2655
6BZ7|1|YA|U|2656
6BZ7|1|YA|A|2657
6BZ7|1|YA|C|2658
*
6BZ7|1|YA|G|2663
6BZ7|1|YA|G|2664
6BZ7|1|YA|A|2665
6BZ7|1|YA|C|2666
6BZ7|1|YA|C|2667
6BZ7|1|YA|G|2668

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YH
50S ribosomal protein L6

Coloring options:


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