3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GGAACUCUG*CUGUC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ7_362 not in the Motif Atlas
Homologous match to IL_7A0S_109
Geometric discrepancy: 0.1277
The information below is about IL_7A0S_109
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22854.4
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
7

Unit IDs

6BZ7|1|RA|G|1666
6BZ7|1|RA|G|1667
6BZ7|1|RA|A|1668
6BZ7|1|RA|A|1669
6BZ7|1|RA|C|1670
6BZ7|1|RA|U|1671
6BZ7|1|RA|C|1672
6BZ7|1|RA|U|1673
6BZ7|1|RA|G|1674
*
6BZ7|1|RA|C|1990
6BZ7|1|RA|U|1991
6BZ7|1|RA|G|1992
6BZ7|1|RA|U|1993
6BZ7|1|RA|C|1994

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RE
50S ribosomal protein L3
Chain RO
50S ribosomal protein L14

Coloring options:


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