IL_7A0S_109

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GGAACUUUG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

7A0S|1|X|G|1683
7A0S|1|X|G|1684
7A0S|1|X|A|1685
7A0S|1|X|A|1686
7A0S|1|X|C|1687
7A0S|1|X|U|1688
7A0S|1|X|U|1689
7A0S|1|X|U|1690
7A0S|1|X|G|1691
*
7A0S|1|X|C|1973
7A0S|1|X|U|1974
7A0S|1|X|G|1975
7A0S|1|X|U|1976
7A0S|1|X|C|1977

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain B

50S ribosomal protein L3

Chain H

50S ribosomal protein L14