IL_6BZ8_023

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

6BZ8|1|QA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_023 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0993

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

6BZ8|1|QA|C|569
6BZ8|1|QA|G|570
6BZ8|1|QA|U|571
6BZ8|1|QA|A|572
6BZ8|1|QA|A|573
6BZ8|1|QA|A|574
6BZ8|1|QA|G|575
*
6BZ8|1|QA|C|880
6BZ8|1|QA|G|881

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QE

30S ribosomal protein S5

Chain QL

30S ribosomal protein S12

Chain QQ

30S ribosomal protein S17