3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
UGAAAGAC*GGGGAG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_027 not in the Motif Atlas
Homologous match to IL_4LFB_026
Geometric discrepancy: 0.293
The information below is about IL_4LFB_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

6BZ8|1|QA|U|605
6BZ8|1|QA|G|606
6BZ8|1|QA|A|607
6BZ8|1|QA|A|608
6BZ8|1|QA|A|609
6BZ8|1|QA|G|610
6BZ8|1|QA|A|611
6BZ8|1|QA|C|612
*
6BZ8|1|QA|G|628
6BZ8|1|QA|G|629
6BZ8|1|QA|G|630
6BZ8|1|QA|G|631
6BZ8|1|QA|A|632
6BZ8|1|QA|G|633

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QD
30S ribosomal protein S4
Chain QH
30S ribosomal protein S8
Chain QP
30S ribosomal protein S16
Chain QQ
30S ribosomal protein S17

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3048 s