IL_6BZ8_090

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGG*CUAC

Length

7 nucleotides

Bulged bases

6BZ8|1|RA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_090 not in the Motif Atlas

Geometric match to IL_3KTW_002

Geometric discrepancy: 0.298

The information below is about IL_3KTW_002

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_43275.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

6BZ8|1|RA|G|880
6BZ8|1|RA|G|881
6BZ8|1|RA|G|882
*
6BZ8|1|RA|C|894
6BZ8|1|RA|U|895
6BZ8|1|RA|A|896
6BZ8|1|RA|C|897

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RQ

50S ribosomal protein L16

Chain RZ

50S ribosomal protein L25