IL_6BZ8_182

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CAUCAG*CGACGACG

Length

14 nucleotides

Bulged bases

6BZ8|1|XA|U|244, 6BZ8|1|XA|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ8_182 not in the Motif Atlas

Homologous match to IL_4LFB_011

Geometric discrepancy: 0.0813

The information below is about IL_4LFB_011

Detailed Annotation

Kink-turn with non-sequential stacking

Broad Annotation

Kink-turn

Motif group

IL_46174.3

Basepair signature

cWW-cSS-tSS-tSH-L-cWW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

6BZ8|1|XA|C|242
6BZ8|1|XA|A|243
6BZ8|1|XA|U|244
6BZ8|1|XA|C|245
6BZ8|1|XA|A|246
6BZ8|1|XA|G|247
*
6BZ8|1|XA|C|277
6BZ8|1|XA|G|278
6BZ8|1|XA|A|279
6BZ8|1|XA|C|280
6BZ8|1|XA|G|281
6BZ8|1|XA|A|282
6BZ8|1|XA|C|283
6BZ8|1|XA|G|284

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XQ

30S ribosomal protein S17