3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
6BZ8|1|YA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_267 not in the Motif Atlas
Homologous match to IL_7A0S_033
Geometric discrepancy: 0.0978
The information below is about IL_7A0S_033
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_38507.2
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
16

Unit IDs

6BZ8|1|YA|C|998
6BZ8|1|YA|U|999
6BZ8|1|YA|A|1000
6BZ8|1|YA|A|1001
6BZ8|1|YA|G|1002
*
6BZ8|1|YA|C|1153
6BZ8|1|YA|G|1154
6BZ8|1|YA|A|1155
6BZ8|1|YA|A|1156
6BZ8|1|YA|G|1157

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y3
50S ribosomal protein L30
Chain YB
5S ribosomal RNA; 5S rRNA
Chain YU
50S ribosomal protein L20
Chain YV
50S ribosomal protein L21

Coloring options:


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