3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
UUGAG*CAAGAUGAG
Length
14 nucleotides
Bulged bases
6BZ8|1|YA|G|2780
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BZ8_332 not in the Motif Atlas
Homologous match to IL_7RQB_102
Geometric discrepancy: 0.1044
The information below is about IL_7RQB_102
Detailed Annotation
tSH-tHS-tHW
Broad Annotation
tSH-tHS-tHW
Motif group
IL_04638.1
Basepair signature
cWW-tSH-tHW-tHS-cSH-cWW-L
Number of instances in this motif group
5

Unit IDs

6BZ8|1|YA|U|2636
6BZ8|1|YA|U|2637
6BZ8|1|YA|G|2638
6BZ8|1|YA|A|2639
6BZ8|1|YA|G|2640
*
6BZ8|1|YA|C|2774
6BZ8|1|YA|A|2775
6BZ8|1|YA|A|2776
6BZ8|1|YA|G|2777
6BZ8|1|YA|A|2778
6BZ8|1|YA|U|2779
6BZ8|1|YA|G|2780
6BZ8|1|YA|A|2781
6BZ8|1|YA|G|2782

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3
Chain YN
50S ribosomal protein L13

Coloring options:


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