IL_6C5L_096
3D structure
- PDB id
- 6C5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6C5L|1|BA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6C5L_096 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1087
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6C5L|1|BA|C|998
6C5L|1|BA|U|999
6C5L|1|BA|A|1000
6C5L|1|BA|A|1001
6C5L|1|BA|G|1002
*
6C5L|1|BA|C|1153
6C5L|1|BA|G|1154
6C5L|1|BA|A|1155
6C5L|1|BA|A|1156
6C5L|1|BA|G|1157
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B3
- 50S ribosomal protein L30
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BU
- 50S ribosomal protein L20
- Chain BV
- 50S ribosomal protein L21
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