IL_6C5L_364
3D structure
- PDB id
- 6C5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CAUG*CAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6C5L_364 not in the Motif Atlas
- Geometric match to IL_4P3T_002
- Geometric discrepancy: 0.2992
- The information below is about IL_4P3T_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01472.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6C5L|1|CA|C|54
6C5L|1|CA|A|55
6C5L|1|CA|U|56
6C5L|1|CA|G|57
*
6C5L|1|CA|C|355
6C5L|1|CA|A|356
6C5L|1|CA|G|357
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CT
- 30S ribosomal protein S20
Coloring options: