IL_6CAO_019

3D structure

PDB id

6CAO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosomal decoding complex at ambient temperature

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6CAO_019 not in the Motif Atlas

Homologous match to IL_4LFB_019

Geometric discrepancy: 0.0732

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6CAO|1|A|G|450
6CAO|1|A|A|451
6CAO|1|A|A|452
6CAO|1|A|A|453
6CAO|1|A|C|454
6CAO|1|A|C|455
*
6CAO|1|A|G|477
6CAO|1|A|A|478
6CAO|1|A|C|479
6CAO|1|A|U|480
6CAO|1|A|G|481
6CAO|1|A|A|482
6CAO|1|A|C|483

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains

Chain P

30S ribosomal protein S16