IL_6CFL_207
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGG*CUAC
- Length
- 7 nucleotides
- Bulged bases
- 6CFL|1|2A|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_207 not in the Motif Atlas
- Geometric match to IL_3TD0_005
- Geometric discrepancy: 0.2754
- The information below is about IL_3TD0_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6CFL|1|2A|G|880
6CFL|1|2A|G|881
6CFL|1|2A|G|882
*
6CFL|1|2A|C|894
6CFL|1|2A|U|895
6CFL|1|2A|A|896
6CFL|1|2A|C|897
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2Z
- 50S ribosomal protein L25
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