IL_6CFL_210
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6CFL|1|2A|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_210 not in the Motif Atlas
- Homologous match to IL_7RQB_036
- Geometric discrepancy: 0.0599
- The information below is about IL_7RQB_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
6CFL|1|2A|C|998
6CFL|1|2A|U|999
6CFL|1|2A|A|1000
6CFL|1|2A|A|1001
6CFL|1|2A|G|1002
*
6CFL|1|2A|C|1153
6CFL|1|2A|G|1154
6CFL|1|2A|A|1155
6CFL|1|2A|A|1156
6CFL|1|2A|G|1157
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 23
- 50S ribosomal protein L30
- Chain 2B
- 5S ribosomal RNA; 5S rRNA
- Chain 2U
- 50S Ribosomal Protein L20
- Chain 2V
- 50S ribosomal protein L21
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