IL_6CFL_357
3D structure
- PDB id
- 6CFL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CGCUGAC*GGUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6CFL|1|2A|G|932
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CFL_357 not in the Motif Atlas
- Homologous match to IL_9DFE_024
- Geometric discrepancy: 0.0696
- The information below is about IL_9DFE_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68243.1
- Basepair signature
- cWW-L-cWW-cWW-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
6CFL|1|2A|C|844
6CFL|1|2A|G|845
6CFL|1|2A|C|846
6CFL|1|2A|U|847
6CFL|1|2A|G|848
6CFL|1|2A|A|849
6CFL|1|2A|C|850
*
6CFL|1|2A|G|927
6CFL|1|2A|G|928
6CFL|1|2A|U|930
6CFL|1|2A|G|931
6CFL|1|2A|G|932
6CFL|1|2A|A|933
6CFL|1|2A|G|934
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 1P
- 50S ribosomal protein L15
- Chain 23
- 50S ribosomal protein L30
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