IL_6CK5_006
3D structure
- PDB id
- 6CK5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PRPP riboswitch from T. mathranii bound to PRPP
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.49 Å
Loop
- Sequence
- CUAG*CGAGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CK5_006 not in the Motif Atlas
- Geometric match to IL_6CK5_001
- Geometric discrepancy: 0.0681
- The information below is about IL_6CK5_001
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_73578.1
- Basepair signature
- cWW-tSH-tHW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6CK5|1|B|C|12
6CK5|1|B|U|13
6CK5|1|B|A|14
6CK5|1|B|G|15
*
6CK5|1|B|C|45
6CK5|1|B|G|46
6CK5|1|B|A|47
6CK5|1|B|G|48
6CK5|1|B|C|49
6CK5|1|B|G|50
Current chains
- Chain B
- PRPP riboswitch
Nearby chains
- Chain A
- Guanidine-I riboswitch
Coloring options: