6CK5 | Motifs

3D	Loop id	Location	Annotation; motif group	Mapped info
	HL_6CK5_001	1/A/27:32	UNCG HL_34617.5
	HL_6CK5_006	1/B/84:92	No text annotation	geometric HL_6DLR_003 HL_84299.4

loop id	Problem	Sequence
HL_6CK5_002	missing nts	No text annotation
HL_6CK5_003	missing nts	No text annotation
HL_6CK5_004	missing nts	No text annotation
HL_6CK5_005	missing nts	No text annotation

Loop id	Location	Annotation; motif group	Mapped info
IL_6CK5_001	1/A/12:15, 1/A/45:50	tSH-tHW IL_21200.1
IL_6CK5_002	1/A/16:20, 1/A/42:44	8-nt loop receptor IL_36516.3
IL_6CK5_003	1/A/21:22, 1/A/39:41	Single bulged C IL_61258.15
IL_6CK5_011	1/A/21:23, 1/A/36:41	No text annotation IL_95570.1
IL_6CK5_005	1/A/80:82, 1/A/94:97	No text annotation IL_96371.1
IL_6CK5_006	1/B/12:15, 1/B/45:50	tSH-tHW	geometric IL_6CK5_001 IL_21200.1
IL_6CK5_007	1/B/16:20, 1/B/42:44	8-nt loop receptor	geometric IL_6CK5_002 IL_36516.3
IL_6CK5_008	1/B/21:22, 1/B/39:41	Single bulged C	geometric IL_3HHN_003 IL_61258.15
IL_6CK5_012	1/B/21:23, 1/B/36:41	No text annotation	homologous IL_6CK5_011 IL_95570.1
IL_6CK5_009	1/B/22:23, 1/B/36:39	Major groove intercalation	geometric IL_5TBW_085 NA
IL_6CK5_010	1/B/80:82, 1/B/94:97	No text annotation	geometric IL_6CK5_005 IL_96371.1

#	loop id	Problem	Sequence
	IL_6CK5_004	missing nts	No text annotation

3D	Loop id	Location	Annotation; motif group	Mapped info
	J4_6CK5_001	1/A/5:7, 1/A/55:56, 1/A/73:77, 1/A/100:106	No text annotation J4_59845.1
	J4_6CK5_002	1/B/5:7, 1/B/55:56, 1/B/73:77, 1/B/100:106	No text annotation	homologous J4_6CK5_001 J4_59845.1

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Coloring options: Nucleotide numbers

6CK5 Hairpin, Internal, and multi-helix Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops