6CK5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6CK5_001 | 1/A/27:32 | UNCG HL_61337.1 | ||
| HL_6CK5_006 | 1/B/84:92 | T-loop related | geometric HL_6DLR_003 HL_36455.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6CK5_002 | No text annotation | ||
| HL_6CK5_003 | No text annotation | ||
| HL_6CK5_004 | No text annotation | ||
| HL_6CK5_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6CK5_001 | 1/A/12:15, 1/A/45:50 | tSH-tHW IL_73578.1 | ||
| IL_6CK5_002 | 1/A/16:20, 1/A/42:44 | 8-nt loop receptor IL_44025.1 | ||
| IL_6CK5_003 | 1/A/21:22, 1/A/39:41 | Single bulged C IL_05642.1 | ||
| IL_6CK5_011 | 1/A/21:23, 1/A/36:41 | No text annotation IL_32983.1 | ||
| IL_6CK5_005 | 1/A/80:82, 1/A/94:97 | No text annotation IL_96371.1 | ||
| IL_6CK5_006 | 1/B/12:15, 1/B/45:50 | tSH-tHW | geometric IL_6CK5_001 IL_73578.1 | |
| IL_6CK5_007 | 1/B/16:20, 1/B/42:44 | 8-nt loop receptor | geometric IL_6CK5_002 IL_44025.1 | |
| IL_6CK5_008 | 1/B/21:22, 1/B/39:41 | Single bulged C | geometric IL_3HHN_003 IL_05642.1 | |
| IL_6CK5_012 | 1/B/21:23, 1/B/36:41 | No text annotation | homologous IL_6CK5_011 IL_32983.1 | |
| IL_6CK5_009 | 1/B/22:23, 1/B/36:39 | Major groove intercalation | geometric IL_5TBW_085 NA | |
| IL_6CK5_010 | 1/B/80:82, 1/B/94:97 | No text annotation | geometric IL_6CK5_005 IL_96371.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6CK5_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_6CK5_001 | 1/A/5:7, 1/A/55:56, 1/A/73:77, 1/A/100:106 | No text annotation J4_59845.1 | ||
| J4_6CK5_002 | 1/B/5:7, 1/B/55:56, 1/B/73:77, 1/B/100:106 | No text annotation | homologous J4_6CK5_001 J4_59845.1 |
Problematic loops
No problematic loops
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