3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
GGAG*CGCCGGUGAAAUAC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6CZR_083 not in the Motif Atlas
Homologous match to IL_7RQB_086
Geometric discrepancy: 0.1726
The information below is about IL_7RQB_086
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6CZR|1|1A|G|2145
6CZR|1|1A|G|2146
6CZR|1|1A|A|2147
6CZR|1|1A|G|2148
*
6CZR|1|1A|C|2182
6CZR|1|1A|G|2183
6CZR|1|1A|C|2184
6CZR|1|1A|C|2185
6CZR|1|1A|G|2186
6CZR|1|1A|G|2187
6CZR|1|1A|U|2188
6CZR|1|1A|G|2189
6CZR|1|1A|A|2190
6CZR|1|1A|A|2191
6CZR|1|1A|A|2192
6CZR|1|1A|U|2193
6CZR|1|1A|A|2194
6CZR|1|1A|C|2195

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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