IL_6CZR_160

3D structure

PDB id

6CZR (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of amicetin bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

UACAAAG*CAAAAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09129.1

Basepair signature

cWW-tWH-tWH-L-R-L-R-tWW-cWW

Number of instances in this motif group

3

Unit IDs

6CZR|1|1a|U|1229
6CZR|1|1a|A|1230
6CZR|1|1a|C|1231
6CZR|1|1a|A|1232
6CZR|1|1a|A|1233
6CZR|1|1a|A|1234
6CZR|1|1a|G|1235
*
6CZR|1|1a|C|1266
6CZR|1|1a|A|1267
6CZR|1|1a|A|1268
6CZR|1|1a|A|1269
6CZR|1|1a|A|1270
6CZR|1|1a|A|1271
6CZR|1|1a|G|1272

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1g

30S ribosomal protein S7

Chain 1i

30S ribosomal protein S9

Chain 1j

30S ribosomal protein S10

Chain 1n

30S ribosomal protein S14 type Z

Chain 1u

30S ribosomal protein Thx