3D structure

PDB id
6CZR (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structure of amicetin bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.14 Å

Loop

Sequence
CGAAU*AUAG
Length
9 nucleotides
Bulged bases
6CZR|1|2A|A|306
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6CZR_182 not in the Motif Atlas
Homologous match to IL_7RQB_011
Geometric discrepancy: 0.2099
The information below is about IL_7RQB_011
Detailed Annotation
tSH-tHW
Broad Annotation
No text annotation
Motif group
IL_04059.1
Basepair signature
cWW-tWH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

6CZR|1|2A|C|303
6CZR|1|2A|G|304
6CZR|1|2A|A|305
6CZR|1|2A|A|306
6CZR|1|2A|U|307
*
6CZR|1|2A|A|380
6CZR|1|2A|U|381
6CZR|1|2A|A|382
6CZR|1|2A|G|383

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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