IL_6CZR_315
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- GGAGUACG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CZR_315 not in the Motif Atlas
- Homologous match to IL_4LFB_034
- Geometric discrepancy: 0.1368
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6CZR|1|2a|G|865
6CZR|1|2a|G|866
6CZR|1|2a|A|867
6CZR|1|2a|G|868
6CZR|1|2a|U|869
6CZR|1|2a|A|870
6CZR|1|2a|C|871
6CZR|1|2a|G|872
*
6CZR|1|2a|U|883
6CZR|1|2a|G|884
6CZR|1|2a|A|885
6CZR|1|2a|A|886
6CZR|1|2a|A|887
6CZR|1|2a|C|888
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2l
- 30S ribosomal protein S12
- Chain 2q
- 30S ribosomal protein S17
Coloring options: