IL_6CZR_336
3D structure
- PDB id
- 6CZR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of amicetin bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.14 Å
Loop
- Sequence
- GGAG*UGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6CZR_336 not in the Motif Atlas
- Homologous match to IL_6CZR_169
- Geometric discrepancy: 0.1571
- The information below is about IL_6CZR_169
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.14
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 36
Unit IDs
6CZR|1|2a|G|1399
6CZR|1|2a|G|1400
6CZR|1|2a|A|1401
6CZR|1|2a|G|1402
*
6CZR|1|2a|U|1459
6CZR|1|2a|G|1460
6CZR|1|2a|A|1461
6CZR|1|2a|C|1462
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2O
- 50S ribosomal protein L14
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