3D structure

PDB id
6D90 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AAAU*AAAU
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6D90|1|4|A|6050
6D90|1|4|A|6051
6D90|1|4|A|6052
6D90|1|4|U|6053
*
6D90|1|4|A|6073
6D90|1|4|A|6074
6D90|1|4|A|6075
6D90|1|4|U|6076

Current chains

Chain 4
CrPV-IRES

Nearby chains

No other chains within 10Å

Coloring options:

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