IL_6D90_153
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGUAAA*UUUAAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D90|1|5|C|1732
6D90|1|5|G|1733
6D90|1|5|G|1734
6D90|1|5|U|1735
6D90|1|5|A|1736
6D90|1|5|A|1737
6D90|1|5|A|1738
*
6D90|1|5|U|1790
6D90|1|5|U|1791
6D90|1|5|U|1792
6D90|1|5|A|1793
6D90|1|5|A|1794
6D90|1|5|A|1795
6D90|1|5|U|1796
6D90|1|5|G|1797
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- uL18
- Chain F
- uL30
- Chain I
- uL16
- Chain S
- eL20
- Chain T
- eL21
Coloring options: