IL_6D90_212
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGGUGUAGAAUAAGU*ACUACU
- Length
- 21 nucleotides
- Bulged bases
- 6D90|1|5|A|3962
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D90|1|5|A|3954
6D90|1|5|G|3955
6D90|1|5|G|3956
6D90|1|5|U|3957
6D90|1|5|G|3958
6D90|1|5|U|3959
6D90|1|5|A|3960
6D90|1|5|G|3961
6D90|1|5|A|3962
6D90|1|5|A|3963
6D90|1|5|U|3964
6D90|1|5|A|3965
6D90|1|5|A|3966
6D90|1|5|G|3967
6D90|1|5|U|3968
*
6D90|1|5|A|4053
6D90|1|5|C|4054
6D90|1|5|U|4055
6D90|1|5|A|4056
6D90|1|5|C|4057
6D90|1|5|U|4058
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 4
- Cripavirus internal ribosome entry site (IRES); CrPV IRES
- Chain K
- uL1
Coloring options: