IL_6D90_213
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAUAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D90|1|5|G|3970
6D90|1|5|G|3971
6D90|1|5|A|3972
6D90|1|5|G|3973
*
6D90|1|5|C|4038
6D90|1|5|G|4039
6D90|1|5|C|4040
6D90|1|5|C|4041
6D90|1|5|G|4042
6D90|1|5|G|4043
6D90|1|5|U|4044
6D90|1|5|G|4045
6D90|1|5|A|4047
6D90|1|5|A|4048
6D90|1|5|U|4049
6D90|1|5|A|4050
6D90|1|5|C|4051
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 4
- Cripavirus internal ribosome entry site (IRES); CrPV IRES
- Chain K
- uL1
Coloring options: