IL_6D90_264

3D structure

PDB id

6D90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUGG*CUAGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D90|1|2|U|152
6D90|1|2|G|153
6D90|1|2|U|154
6D90|1|2|G|155
6D90|1|2|G|156
*
6D90|1|2|C|162
6D90|1|2|U|163
6D90|1|2|A|164
6D90|1|2|G|165
6D90|1|2|A|166

Current chains

Chain 2

18S rRNA

Nearby chains

Chain HH

eS6

Chain W

eL24

Chain ZZ

eS24