IL_6D90_273

3D structure

PDB id

6D90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACGGCC*GAAUGUUU

Length

15 nucleotides

Bulged bases

6D90|1|2|U|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D90|1|2|G|925
6D90|1|2|A|926
6D90|1|2|C|927
6D90|1|2|G|928
6D90|1|2|G|929
6D90|1|2|C|930
6D90|1|2|C|931
*
6D90|1|2|G|1010
6D90|1|2|A|1011
6D90|1|2|A|1012
6D90|1|2|U|1013
6D90|1|2|G|1014
6D90|1|2|U|1015
6D90|1|2|U|1016
6D90|1|2|U|1017

Current chains

Chain 2

18S rRNA

Nearby chains

Chain CC

eS1

Chain OO

uS15

Chain c

eL30

Chain cc

eS27