IL_6D90_283

3D structure

PDB id

6D90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACUAGUUA*UAACUUCU

Length

16 nucleotides

Bulged bases

6D90|1|2|C|1403, 6D90|1|2|U|1404

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D90|1|2|A|1402
6D90|1|2|C|1403
6D90|1|2|U|1404
6D90|1|2|A|1405
6D90|1|2|G|1406
6D90|1|2|U|1407
6D90|1|2|U|1408
6D90|1|2|A|1409
*
6D90|1|2|U|1432
6D90|1|2|A|1438
6D90|1|2|A|1439
6D90|1|2|C|1440
6D90|1|2|U|1441
6D90|1|2|U|1442
6D90|1|2|C|1443
6D90|1|2|U|1444

Current chains

Chain 2

18S rRNA

Nearby chains

Chain RR

uS9

Chain VV

uS10

Chain hh

RACK1