IL_6D90_321

3D structure

PDB id

6D90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAA*UACCC

Length

9 nucleotides

Bulged bases

6D90|1|5|A|3901, 6D90|1|5|C|4560

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D90|1|5|G|3899
6D90|1|5|G|3900
6D90|1|5|A|3901
6D90|1|5|A|3902
*
6D90|1|5|U|4558
6D90|1|5|A|4559
6D90|1|5|C|4560
6D90|1|5|C|4561
6D90|1|5|C|4562

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain P

uL22