IL_6D90_356
3D structure
- PDB id
- 6D90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUG*CGCUAAGGAGUGUGUAACAACUCAC
- Length
- 29 nucleotides
- Bulged bases
- 6D90|1|5|A|2002
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6D90|1|5|G|1969
6D90|1|5|A|1970
6D90|1|5|U|1971
6D90|1|5|G|1972
*
6D90|1|5|C|1994
6D90|1|5|G|1995
6D90|1|5|C|1996
6D90|1|5|U|1997
6D90|1|5|A|1998
6D90|1|5|A|1999
6D90|1|5|G|2000
6D90|1|5|G|2001
6D90|1|5|A|2002
6D90|1|5|G|2003
6D90|1|5|U|2004
6D90|1|5|G|2005
6D90|1|5|U|2006
6D90|1|5|G|2007
6D90|1|5|U|2008
6D90|1|5|A|2009
6D90|1|5|A|2010
6D90|1|5|C|2011
6D90|1|5|A|2012
6D90|1|5|A|2013
6D90|1|5|C|2014
6D90|1|5|U|2015
6D90|1|5|C|2016
6D90|1|5|A|2017
6D90|1|5|C|2018
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain jj
- eRF1
- Chain m
- eL40
- Chain s
- uL10
- Chain t
- uL11
Coloring options: