IL_6D9J_059

3D structure

PDB id

6D9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

6D9J|1|2|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6D9J|1|2|G|1281
6D9J|1|2|A|1282
6D9J|1|2|C|1283
6D9J|1|2|A|1284
6D9J|1|2|G|1285
6D9J|1|2|G|1286
6D9J|1|2|A|1287
*
6D9J|1|2|U|1314
6D9J|1|2|U|1315
6D9J|1|2|C|1316

Current chains

Chain 2

18S rRNA

Nearby chains

Chain LL

eS10

Chain NN

eS12

Chain gg

eS31